Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.3■□□□□ 0.68
PDGFRAP16234 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.3■□□□□ 0.68
PDGFRAP16234 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.3■□□□□ 0.68
PDGFRAP16234 SEC1P-202ENST00000473944 940 ntBASIC19.3■□□□□ 0.68
PDGFRAP16234 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.3■□□□□ 0.68
PDGFRAP16234 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.3■□□□□ 0.68
PDGFRAP16234 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.3■□□□□ 0.68
PDGFRAP16234 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.3■□□□□ 0.68
PDGFRAP16234 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.3■□□□□ 0.68
PDGFRAP16234 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.3■□□□□ 0.68
PDGFRAP16234 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PDGFRAP16234 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDGFRAP16234 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PDGFRAP16234 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDGFRAP16234 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
PDGFRAP16234 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 AC009102.3-201ENST00000623118 1491 ntBASIC19.29■□□□□ 0.68
PDGFRAP16234 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDGFRAP16234 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.29■□□□□ 0.68
PDGFRAP16234 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 MIR149-201ENST00000384879 89 ntBASIC19.29■□□□□ 0.68
PDGFRAP16234 AP000523.1-201ENST00000398242 1049 ntBASIC19.29■□□□□ 0.68
PDGFRAP16234 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.29■□□□□ 0.68
PDGFRAP16234 AK4P3-201ENST00000418260 669 ntBASIC19.29■□□□□ 0.68
PDGFRAP16234 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.29■□□□□ 0.68
PDGFRAP16234 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 COX11P1-201ENST00000489116 835 ntBASIC19.29■□□□□ 0.68
PDGFRAP16234 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.29■□□□□ 0.68
PDGFRAP16234 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.29■□□□□ 0.68
PDGFRAP16234 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDGFRAP16234 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 SDHAP2-201ENST00000455183 2001 ntBASIC19.29■□□□□ 0.68
PDGFRAP16234 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDGFRAP16234 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.28■□□□□ 0.68
PDGFRAP16234 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.28■□□□□ 0.68
PDGFRAP16234 MIR3180-4-201ENST00000582223 153 ntBASIC19.28■□□□□ 0.68
PDGFRAP16234 AC010240.3-201ENST00000607688 395 ntBASIC19.28■□□□□ 0.68
PDGFRAP16234 AL023973.1-201ENST00000624619 620 ntBASIC19.28■□□□□ 0.68
PDGFRAP16234 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.28■□□□□ 0.68
PDGFRAP16234 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDGFRAP16234 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDGFRAP16234 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms