Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPRFP10586 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPRFP10586 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPRFP10586 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPRFP10586 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPRFP10586 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPRFP10586 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPRFP10586 OR7E14P-202ENST00000530490 1290 ntBASIC21.04■□□□□ 0.96
PTPRFP10586 AC083906.6-201ENST00000641366 219 ntBASIC21.04■□□□□ 0.96
PTPRFP10586 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PTPRFP10586 AFG3L1P-217ENST00000557444 2447 ntBASIC21.03■□□□□ 0.96
PTPRFP10586 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTPRFP10586 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPRFP10586 AC007952.6-201ENST00000573168 2673 ntBASIC21.03■□□□□ 0.96
PTPRFP10586 AC003957.1-201ENST00000625108 2673 ntBASIC21.03■□□□□ 0.96
PTPRFP10586 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPRFP10586 AC009533.2-201ENST00000543664 586 ntBASIC21.03■□□□□ 0.96
PTPRFP10586 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.03■□□□□ 0.96
PTPRFP10586 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PTPRFP10586 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPRFP10586 AC125634.1-201ENST00000438758 1403 ntBASIC21.03■□□□□ 0.96
PTPRFP10586 PMS2P7-201ENST00000506558 1336 ntBASIC21.03■□□□□ 0.96
PTPRFP10586 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPRFP10586 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPRFP10586 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.02■□□□□ 0.96
PTPRFP10586 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTPRFP10586 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPRFP10586 MTCL1P1-201ENST00000446207 792 ntBASIC21.02■□□□□ 0.96
PTPRFP10586 AC068472.1-201ENST00000474589 881 ntBASIC21.02■□□□□ 0.96
PTPRFP10586 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPRFP10586 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPRFP10586 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PTPRFP10586 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PTPRFP10586 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPRFP10586 LINC01126-201ENST00000623515 1646 ntBASIC21.02■□□□□ 0.96
PTPRFP10586 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPRFP10586 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPRFP10586 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 MYLKP1-201ENST00000509077 1580 ntBASIC21.02■□□□□ 0.96
PTPRFP10586 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPRFP10586 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.02■□□□□ 0.95
PTPRFP10586 AC132008.2-207ENST00000454517 770 ntBASIC21.02■□□□□ 0.95
PTPRFP10586 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.02■□□□□ 0.95
PTPRFP10586 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.02■□□□□ 0.95
PTPRFP10586 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.02■□□□□ 0.95
PTPRFP10586 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPRFP10586 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPRFP10586 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.01■□□□□ 0.95
PTPRFP10586 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.01■□□□□ 0.95
PTPRFP10586 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPRFP10586 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPRFP10586 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPRFP10586 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPRFP10586 AC116407.3-201ENST00000623905 1129 ntBASIC21.01■□□□□ 0.95
PTPRFP10586 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPRFP10586 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21■□□□□ 0.95
PTPRFP10586 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21■□□□□ 0.95
PTPRFP10586 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21■□□□□ 0.95
PTPRFP10586 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PTPRFP10586 AC093909.1-201ENST00000504731 1122 ntBASIC21■□□□□ 0.95
PTPRFP10586 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21■□□□□ 0.95
PTPRFP10586 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21■□□□□ 0.95
PTPRFP10586 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21■□□□□ 0.95
PTPRFP10586 AC008687.5-201ENST00000593746 558 ntBASIC21■□□□□ 0.95
PTPRFP10586 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21■□□□□ 0.95
PTPRFP10586 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms