Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINGO3P0C6S8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINGO3P0C6S8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINGO3P0C6S8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 AC090340.1-201ENST00000620778 4980 ntBASIC17.8■□□□□ 0.44
LINGO3P0C6S8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 LINC01126-201ENST00000623515 1646 ntBASIC17.8■□□□□ 0.44
LINGO3P0C6S8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 AC239809.2-201ENST00000415381 517 ntBASIC17.8■□□□□ 0.44
LINGO3P0C6S8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 AC133681.1-201ENST00000465482 601 ntBASIC17.8■□□□□ 0.44
LINGO3P0C6S8 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 AC124016.1-201ENST00000609552 612 ntBASIC17.8■□□□□ 0.44
LINGO3P0C6S8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 NBPF21P-201ENST00000425093 1451 ntBASIC17.8■□□□□ 0.44
LINGO3P0C6S8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINGO3P0C6S8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 KRASP1-201ENST00000407852 552 ntBASIC17.79■□□□□ 0.44
LINGO3P0C6S8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 KRT8P8-201ENST00000434750 1448 ntBASIC17.79■□□□□ 0.44
LINGO3P0C6S8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINGO3P0C6S8 AL162741.1-201ENST00000565563 1558 ntBASIC17.79■□□□□ 0.44
LINGO3P0C6S8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 AC092850.2-201ENST00000623821 2697 ntBASIC17.78■□□□□ 0.44
LINGO3P0C6S8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 TUBB8P6-201ENST00000436895 1288 ntBASIC17.78■□□□□ 0.44
LINGO3P0C6S8 RPPH1-201ENST00000516869 333 ntBASIC17.78■□□□□ 0.44
LINGO3P0C6S8 C1QBPP2-201ENST00000528754 825 ntBASIC17.78■□□□□ 0.44
LINGO3P0C6S8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 LINC00554-201ENST00000564841 3011 ntBASIC17.78■□□□□ 0.44
LINGO3P0C6S8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LINGO3P0C6S8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms