Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC6P09630 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC6P09630 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC6P09630 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC6P09630 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 PMS2P7-201ENST00000506558 1336 ntBASIC20.72■□□□□ 0.91
HOXC6P09630 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXC6P09630 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC6P09630 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.72■□□□□ 0.91
HOXC6P09630 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC6P09630 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HOXC6P09630 AL032819.2-201ENST00000624543 2162 ntBASIC20.71■□□□□ 0.91
HOXC6P09630 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC6P09630 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HOXC6P09630 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC6P09630 HNRNPDP1-201ENST00000439535 754 ntBASIC20.71■□□□□ 0.91
HOXC6P09630 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXC6P09630 POLD2P1-201ENST00000511220 997 ntBASIC20.71■□□□□ 0.91
HOXC6P09630 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC6P09630 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC6P09630 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
HOXC6P09630 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HOXC6P09630 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC6P09630 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC6P09630 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC6P09630 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
HOXC6P09630 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
HOXC6P09630 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXC6P09630 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC6P09630 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
HOXC6P09630 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.7■□□□□ 0.9
HOXC6P09630 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC6P09630 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXC6P09630 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXC6P09630 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXC6P09630 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXC6P09630 MTDHP3-201ENST00000594186 672 ntBASIC20.7■□□□□ 0.9
HOXC6P09630 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HOXC6P09630 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC6P09630 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXC6P09630 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXC6P09630 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HOXC6P09630 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 INTS4P1-201ENST00000438455 1935 ntBASIC20.69■□□□□ 0.9
HOXC6P09630 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC6P09630 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC6P09630 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 AC009533.2-201ENST00000543664 586 ntBASIC20.69■□□□□ 0.9
HOXC6P09630 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXC6P09630 AP001269.4-201ENST00000609611 512 ntBASIC20.69■□□□□ 0.9
HOXC6P09630 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC6P09630 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC6P09630 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXC6P09630 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXC6P09630 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 AC116562.4-201ENST00000641316 2276 ntBASIC20.69■□□□□ 0.9
HOXC6P09630 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC6P09630 AC009102.3-201ENST00000623118 1491 ntBASIC20.69■□□□□ 0.9
HOXC6P09630 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms