Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AC068472.1-201ENST00000474589 881 ntBASIC20.1■□□□□ 0.81
COL1A2P08123 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A2P08123 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A2P08123 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A2P08123 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL1A2P08123 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
COL1A2P08123 KRT18P65-201ENST00000439811 1286 ntBASIC20.09■□□□□ 0.81
COL1A2P08123 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.09■□□□□ 0.81
COL1A2P08123 EMBP1-201ENST00000458200 901 ntBASIC20.09■□□□□ 0.81
COL1A2P08123 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.09■□□□□ 0.81
COL1A2P08123 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.09■□□□□ 0.81
COL1A2P08123 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.09■□□□□ 0.81
COL1A2P08123 BNIP3P18-201ENST00000593976 575 ntBASIC20.09■□□□□ 0.81
COL1A2P08123 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.09■□□□□ 0.81
COL1A2P08123 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.09■□□□□ 0.81
COL1A2P08123 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL1A2P08123 AC099343.3-201ENST00000605834 2503 ntBASIC20.09■□□□□ 0.81
COL1A2P08123 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL1A2P08123 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL1A2P08123 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL1A2P08123 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL1A2P08123 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
COL1A2P08123 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 NUS1P2-201ENST00000417358 873 ntBASIC20.08■□□□□ 0.81
COL1A2P08123 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.08■□□□□ 0.81
COL1A2P08123 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.08■□□□□ 0.81
COL1A2P08123 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL1A2P08123 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL1A2P08123 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.08■□□□□ 0.81
COL1A2P08123 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.08■□□□□ 0.81
COL1A2P08123 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
COL1A2P08123 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
COL1A2P08123 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL1A2P08123 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL1A2P08123 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
COL1A2P08123 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COL1A2P08123 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.08■□□□□ 0.8
COL1A2P08123 AC005336.2-201ENST00000593183 939 ntBASIC20.08■□□□□ 0.8
COL1A2P08123 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.08■□□□□ 0.8
COL1A2P08123 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL1A2P08123 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.08■□□□□ 0.8
COL1A2P08123 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A2P08123 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL1A2P08123 GMCL1P1-201ENST00000463439 1581 ntBASIC20.07■□□□□ 0.8
COL1A2P08123 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A2P08123 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.07■□□□□ 0.8
COL1A2P08123 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A2P08123 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.07■□□□□ 0.8
COL1A2P08123 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 LINC00602-201ENST00000629776 2065 ntBASIC20.07■□□□□ 0.8
COL1A2P08123 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL1A2P08123 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms