Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APOEP02649 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOEP02649 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APOEP02649 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
APOEP02649 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APOEP02649 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.26■□□□□ 0.67
APOEP02649 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.26■□□□□ 0.67
APOEP02649 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.26■□□□□ 0.67
APOEP02649 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 AP000593.1-201ENST00000393668 712 ntBASIC19.26■□□□□ 0.67
APOEP02649 FAM8A6P-201ENST00000407496 1135 ntBASIC19.26■□□□□ 0.67
APOEP02649 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 AL359075.1-203ENST00000462729 1002 ntBASIC19.26■□□□□ 0.67
APOEP02649 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 AC104390.1-201ENST00000555663 520 ntBASIC19.26■□□□□ 0.67
APOEP02649 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.26■□□□□ 0.67
APOEP02649 MYC-208ENST00000641036 567 ntBASIC19.26■□□□□ 0.67
APOEP02649 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.26■□□□□ 0.67
APOEP02649 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOEP02649 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.26■□□□□ 0.67
APOEP02649 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.26■□□□□ 0.67
APOEP02649 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.26■□□□□ 0.67
APOEP02649 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
APOEP02649 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
APOEP02649 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
APOEP02649 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
APOEP02649 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
APOEP02649 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.25■□□□□ 0.67
APOEP02649 AC005082.1-201ENST00000413042 2259 ntBASIC19.25■□□□□ 0.67
APOEP02649 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.25■□□□□ 0.67
APOEP02649 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.25■□□□□ 0.67
APOEP02649 KRT18P41-201ENST00000518924 1277 ntBASIC19.25■□□□□ 0.67
APOEP02649 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.25■□□□□ 0.67
APOEP02649 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
APOEP02649 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.25■□□□□ 0.67
APOEP02649 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
APOEP02649 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.25■□□□□ 0.67
APOEP02649 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.25■□□□□ 0.67
APOEP02649 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOEP02649 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 AC007613.1-201ENST00000572811 2597 ntBASIC19.24■□□□□ 0.67
APOEP02649 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 STARP1-201ENST00000397973 869 ntBASIC19.24■□□□□ 0.67
APOEP02649 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
APOEP02649 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.24■□□□□ 0.67
APOEP02649 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.24■□□□□ 0.67
APOEP02649 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.24■□□□□ 0.67
APOEP02649 AC009065.1-201ENST00000564055 1225 ntBASIC19.24■□□□□ 0.67
APOEP02649 NTF6B-201ENST00000591913 560 ntBASIC19.24■□□□□ 0.67
APOEP02649 AC010240.3-201ENST00000607688 395 ntBASIC19.24■□□□□ 0.67
APOEP02649 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.24■□□□□ 0.67
APOEP02649 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOEP02649 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms