Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.91■□□□□ 0.94
ALDH1A1P00352 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALDH1A1P00352 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 AC002310.6-201ENST00000624451 1377 ntBASIC20.9■□□□□ 0.94
ALDH1A1P00352 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.9■□□□□ 0.94
ALDH1A1P00352 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALDH1A1P00352 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ALDH1A1P00352 LINC00565-201ENST00000562710 2331 ntBASIC20.89■□□□□ 0.94
ALDH1A1P00352 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ALDH1A1P00352 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ALDH1A1P00352 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ALDH1A1P00352 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.89■□□□□ 0.93
ALDH1A1P00352 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.89■□□□□ 0.93
ALDH1A1P00352 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.89■□□□□ 0.93
ALDH1A1P00352 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.89■□□□□ 0.93
ALDH1A1P00352 MIR4469-201ENST00000583919 79 ntBASIC20.89■□□□□ 0.93
ALDH1A1P00352 AC006557.2-201ENST00000592985 1240 ntBASIC20.89■□□□□ 0.93
ALDH1A1P00352 AC011467.4-201ENST00000594891 528 ntBASIC20.89■□□□□ 0.93
ALDH1A1P00352 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ALDH1A1P00352 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ALDH1A1P00352 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALDH1A1P00352 AC009102.3-201ENST00000623118 1491 ntBASIC20.88■□□□□ 0.93
ALDH1A1P00352 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 AP002472.1-201ENST00000577490 586 ntBASIC20.88■□□□□ 0.93
ALDH1A1P00352 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 AP000867.4-201ENST00000641616 219 ntBASIC20.88■□□□□ 0.93
ALDH1A1P00352 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ALDH1A1P00352 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALDH1A1P00352 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 CNN2P11-201ENST00000429351 262 ntBASIC20.87■□□□□ 0.93
ALDH1A1P00352 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms