Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN1O95832 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 AC116562.4-201ENST00000641316 2276 ntBASIC16.4■□□□□ 0.22
CLDN1O95832 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN1O95832 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN1O95832 NSUN5P1-202ENST00000421140 1535 ntBASIC16.4■□□□□ 0.22
CLDN1O95832 NSUN5P2-203ENST00000457352 1529 ntBASIC16.4■□□□□ 0.22
CLDN1O95832 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLDN1O95832 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 AP003733.1-201ENST00000491725 852 ntBASIC16.4■□□□□ 0.22
CLDN1O95832 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN1O95832 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDN1O95832 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN1O95832 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN1O95832 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN1O95832 BCL2-203ENST00000589955 5011 ntBASIC16.4■□□□□ 0.22
CLDN1O95832 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN1O95832 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.39■□□□□ 0.22
CLDN1O95832 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN1O95832 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 AL158211.5-201ENST00000623583 2518 ntBASIC16.39■□□□□ 0.21
CLDN1O95832 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN1O95832 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 MCCD1P1-208ENST00000445732 328 ntBASIC16.39■□□□□ 0.21
CLDN1O95832 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CLDN1O95832 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN1O95832 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN1O95832 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.39■□□□□ 0.21
CLDN1O95832 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN1O95832 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN1O95832 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN1O95832 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN1O95832 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN1O95832 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN1O95832 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN1O95832 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN1O95832 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN1O95832 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN1O95832 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN1O95832 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN1O95832 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN1O95832 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN1O95832 AL049840.3-201ENST00000602669 611 ntBASIC16.38■□□□□ 0.21
CLDN1O95832 AC140113.2-201ENST00000604370 208 ntBASIC16.38■□□□□ 0.21
CLDN1O95832 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN1O95832 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN1O95832 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN1O95832 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN1O95832 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms