Protein–RNA interactions for Protein: O95754

SEMA4F, Semaphorin-4F, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4FO95754 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SEMA4FO95754 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.17■□□□□ 0.5
SEMA4FO95754 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.17■□□□□ 0.5
SEMA4FO95754 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4FO95754 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4FO95754 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.17■□□□□ 0.5
SEMA4FO95754 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
SEMA4FO95754 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SEMA4FO95754 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4FO95754 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4FO95754 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4FO95754 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
SEMA4FO95754 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.16■□□□□ 0.5
SEMA4FO95754 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.16■□□□□ 0.5
SEMA4FO95754 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.16■□□□□ 0.5
SEMA4FO95754 AF238378.1-201ENST00000526806 358 ntBASIC18.16■□□□□ 0.5
SEMA4FO95754 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.16■□□□□ 0.5
SEMA4FO95754 AL591684.3-201ENST00000605187 298 ntBASIC18.16■□□□□ 0.5
SEMA4FO95754 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 SDHAP2-201ENST00000455183 2001 ntBASIC18.16■□□□□ 0.5
SEMA4FO95754 AC073130.3-201ENST00000624389 2278 ntBASIC18.16■□□□□ 0.5
SEMA4FO95754 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4FO95754 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4FO95754 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SEMA4FO95754 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.16■□□□□ 0.5
SEMA4FO95754 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SEMA4FO95754 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.15■□□□□ 0.5
SEMA4FO95754 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.15■□□□□ 0.5
SEMA4FO95754 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4FO95754 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.15■□□□□ 0.5
SEMA4FO95754 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4FO95754 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4FO95754 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.15■□□□□ 0.5
SEMA4FO95754 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SEMA4FO95754 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4FO95754 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
SEMA4FO95754 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.14■□□□□ 0.5
SEMA4FO95754 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SEMA4FO95754 AL024508.2-201ENST00000607749 1894 ntBASIC18.14■□□□□ 0.49
SEMA4FO95754 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4FO95754 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4FO95754 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4FO95754 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.14■□□□□ 0.49
SEMA4FO95754 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SEMA4FO95754 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4FO95754 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4FO95754 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.14■□□□□ 0.49
SEMA4FO95754 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4FO95754 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.14■□□□□ 0.49
SEMA4FO95754 MIR5100-201ENST00000579544 119 ntBASIC18.14■□□□□ 0.49
SEMA4FO95754 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 AC114341.1-201ENST00000618070 349 ntBASIC18.14■□□□□ 0.49
SEMA4FO95754 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4FO95754 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4FO95754 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4FO95754 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.14■□□□□ 0.49
SEMA4FO95754 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SEMA4FO95754 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4FO95754 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.14■□□□□ 0.49
SEMA4FO95754 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms