Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDKL5O76039 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDKL5O76039 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.38■■□□□ 1.01
CDKL5O76039 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.38■■□□□ 1.01
CDKL5O76039 SLC25A3P1-201ENST00000443844 931 ntBASIC21.38■■□□□ 1.01
CDKL5O76039 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.38■■□□□ 1.01
CDKL5O76039 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDKL5O76039 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.38■■□□□ 1.01
CDKL5O76039 AC024243.1-201ENST00000609234 778 ntBASIC21.38■■□□□ 1.01
CDKL5O76039 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDKL5O76039 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDKL5O76039 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDKL5O76039 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDKL5O76039 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKL5O76039 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDKL5O76039 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CDKL5O76039 AC090340.1-201ENST00000620778 4980 ntBASIC21.37■■□□□ 1.01
CDKL5O76039 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
CDKL5O76039 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.37■■□□□ 1.01
CDKL5O76039 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.37■■□□□ 1.01
CDKL5O76039 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.37■■□□□ 1.01
CDKL5O76039 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.37■■□□□ 1.01
CDKL5O76039 AC133561.5-201ENST00000635547 218 ntBASIC21.37■■□□□ 1.01
CDKL5O76039 AC092865.7-201ENST00000641832 219 ntBASIC21.37■■□□□ 1.01
CDKL5O76039 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.37■■□□□ 1.01
CDKL5O76039 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDKL5O76039 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDKL5O76039 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.36■■□□□ 1.01
CDKL5O76039 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 AC141257.4-201ENST00000634557 245 ntBASIC21.36■■□□□ 1.01
CDKL5O76039 AC136944.6-201ENST00000634818 245 ntBASIC21.36■■□□□ 1.01
CDKL5O76039 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.36■■□□□ 1.01
CDKL5O76039 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDKL5O76039 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL5O76039 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKL5O76039 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CDKL5O76039 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKL5O76039 LIN28AP1-201ENST00000429574 405 ntBASIC21.35■■□□□ 1.01
CDKL5O76039 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.35■■□□□ 1.01
CDKL5O76039 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.35■■□□□ 1.01
CDKL5O76039 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKL5O76039 AL138966.2-201ENST00000621997 464 ntBASIC21.35■■□□□ 1.01
CDKL5O76039 AC097493.4-201ENST00000641197 219 ntBASIC21.35■■□□□ 1.01
CDKL5O76039 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKL5O76039 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL5O76039 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKL5O76039 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDKL5O76039 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDKL5O76039 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.35■■□□□ 1.01
CDKL5O76039 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.34■■□□□ 1.01
CDKL5O76039 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms