Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFS3O75489 KRT18P22-201ENST00000402024 1347 ntBASIC18.34■□□□□ 0.53
NDUFS3O75489 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NDUFS3O75489 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.34■□□□□ 0.53
NDUFS3O75489 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.34■□□□□ 0.53
NDUFS3O75489 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.34■□□□□ 0.53
NDUFS3O75489 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.34■□□□□ 0.53
NDUFS3O75489 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.34■□□□□ 0.53
NDUFS3O75489 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFS3O75489 FAM87A-204ENST00000613235 858 ntBASIC18.34■□□□□ 0.53
NDUFS3O75489 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.34■□□□□ 0.53
NDUFS3O75489 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFS3O75489 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFS3O75489 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFS3O75489 AL163051.1-201ENST00000569214 1512 ntBASIC18.33■□□□□ 0.53
NDUFS3O75489 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.33■□□□□ 0.53
NDUFS3O75489 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NDUFS3O75489 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
NDUFS3O75489 ABALON-201ENST00000629058 1903 ntBASIC18.33■□□□□ 0.53
NDUFS3O75489 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 AL354751.1-201ENST00000412768 1863 ntBASIC18.33■□□□□ 0.53
NDUFS3O75489 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.33■□□□□ 0.53
NDUFS3O75489 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
NDUFS3O75489 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFS3O75489 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
NDUFS3O75489 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NDUFS3O75489 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
NDUFS3O75489 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.33■□□□□ 0.52
NDUFS3O75489 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
NDUFS3O75489 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFS3O75489 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.33■□□□□ 0.52
NDUFS3O75489 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.33■□□□□ 0.52
NDUFS3O75489 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.33■□□□□ 0.52
NDUFS3O75489 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFS3O75489 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFS3O75489 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFS3O75489 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.33■□□□□ 0.52
NDUFS3O75489 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFS3O75489 AC007613.1-201ENST00000572811 2597 ntBASIC18.33■□□□□ 0.52
NDUFS3O75489 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.32■□□□□ 0.52
NDUFS3O75489 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 AC087499.1-201ENST00000418141 1075 ntBASIC18.32■□□□□ 0.52
NDUFS3O75489 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.32■□□□□ 0.52
NDUFS3O75489 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.32■□□□□ 0.52
NDUFS3O75489 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.32■□□□□ 0.52
NDUFS3O75489 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
NDUFS3O75489 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
NDUFS3O75489 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NDUFS3O75489 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFS3O75489 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NDUFS3O75489 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NDUFS3O75489 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 PKD1P1-201ENST00000458669 6805 ntBASIC18.31■□□□□ 0.52
NDUFS3O75489 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFS3O75489 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms