Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PDCD6O75340 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDCD6O75340 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.55■□□□□ 0.08
PDCD6O75340 KRT8P50-201ENST00000562022 1438 ntBASIC15.55■□□□□ 0.08
PDCD6O75340 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.55■□□□□ 0.08
PDCD6O75340 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDCD6O75340 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 MFAP1P1-201ENST00000442257 1255 ntBASIC15.55■□□□□ 0.08
PDCD6O75340 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.55■□□□□ 0.08
PDCD6O75340 SLC25A1P4-201ENST00000567977 778 ntBASIC15.55■□□□□ 0.08
PDCD6O75340 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 AL359736.2-201ENST00000621992 437 ntBASIC15.55■□□□□ 0.08
PDCD6O75340 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDCD6O75340 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PDCD6O75340 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDCD6O75340 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PDCD6O75340 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.54■□□□□ 0.08
PDCD6O75340 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.54■□□□□ 0.08
PDCD6O75340 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDCD6O75340 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.54■□□□□ 0.08
PDCD6O75340 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDCD6O75340 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 AC134043.2-201ENST00000624206 2238 ntBASIC15.53■□□□□ 0.08
PDCD6O75340 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.53■□□□□ 0.08
PDCD6O75340 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PDCD6O75340 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.53■□□□□ 0.08
PDCD6O75340 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDCD6O75340 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDCD6O75340 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDCD6O75340 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PDCD6O75340 CA15P1-201ENST00000481698 905 ntBASIC15.53■□□□□ 0.08
PDCD6O75340 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.53■□□□□ 0.08
PDCD6O75340 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.53■□□□□ 0.08
PDCD6O75340 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.53■□□□□ 0.08
PDCD6O75340 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.53■□□□□ 0.08
PDCD6O75340 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PDCD6O75340 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDCD6O75340 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PDCD6O75340 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.52■□□□□ 0.08
PDCD6O75340 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PDCD6O75340 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PDCD6O75340 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PDCD6O75340 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.52■□□□□ 0.08
PDCD6O75340 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDCD6O75340 AC116562.2-201ENST00000507042 360 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms