Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GFRA3O60609 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 SDHAP1-207ENST00000440850 2000 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.79■□□□□ 0.44
GFRA3O60609 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.79■□□□□ 0.44
GFRA3O60609 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.79■□□□□ 0.44
GFRA3O60609 BASP1P1-201ENST00000430708 665 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 FAM58CP-201ENST00000435741 640 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.79■□□□□ 0.44
GFRA3O60609 BX005266.1-201ENST00000473402 457 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 AC067863.1-201ENST00000494933 530 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.79■□□□□ 0.44
GFRA3O60609 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.79■□□□□ 0.44
GFRA3O60609 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.79■□□□□ 0.44
GFRA3O60609 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.79■□□□□ 0.44
GFRA3O60609 MIR6799-201ENST00000620297 69 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 AL022326.1-202ENST00000641533 845 ntBASIC17.79■□□□□ 0.44
GFRA3O60609 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.79■□□□□ 0.44
GFRA3O60609 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.79■□□□□ 0.44
GFRA3O60609 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GFRA3O60609 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GFRA3O60609 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.78■□□□□ 0.44
GFRA3O60609 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.78■□□□□ 0.44
GFRA3O60609 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
GFRA3O60609 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.78■□□□□ 0.44
GFRA3O60609 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.78■□□□□ 0.44
GFRA3O60609 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GFRA3O60609 AP005018.1-201ENST00000525475 301 ntBASIC17.78■□□□□ 0.44
GFRA3O60609 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.78■□□□□ 0.44
GFRA3O60609 DUX4L27-201ENST00000554796 1261 ntBASIC17.78■□□□□ 0.44
GFRA3O60609 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.78■□□□□ 0.44
GFRA3O60609 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.78■□□□□ 0.44
GFRA3O60609 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GFRA3O60609 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 AL358472.5-202ENST00000641448 1267 ntBASIC17.78■□□□□ 0.44
GFRA3O60609 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.78■□□□□ 0.44
GFRA3O60609 AC125634.1-201ENST00000438758 1403 ntBASIC17.78■□□□□ 0.44
GFRA3O60609 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GFRA3O60609 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.78■□□□□ 0.44
GFRA3O60609 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.77■□□□□ 0.44
GFRA3O60609 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GFRA3O60609 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GFRA3O60609 AC004461.1-201ENST00000412461 403 ntBASIC17.77■□□□□ 0.44
GFRA3O60609 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.77■□□□□ 0.44
GFRA3O60609 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 HCG4B-203ENST00000450128 991 ntBASIC17.77■□□□□ 0.44
GFRA3O60609 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 CR383656.12-201ENST00000549567 513 ntBASIC17.77■□□□□ 0.44
GFRA3O60609 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.77■□□□□ 0.44
GFRA3O60609 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.77■□□□□ 0.44
GFRA3O60609 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.77■□□□□ 0.44
GFRA3O60609 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
GFRA3O60609 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GFRA3O60609 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms