Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZIC3O60481 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.52■□□□□ 0.23
ZIC3O60481 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ZIC3O60481 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
ZIC3O60481 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.52■□□□□ 0.23
ZIC3O60481 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZIC3O60481 Z83836.1-201ENST00000624605 1642 ntBASIC16.52■□□□□ 0.23
ZIC3O60481 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZIC3O60481 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZIC3O60481 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ZIC3O60481 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ZIC3O60481 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
ZIC3O60481 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.51■□□□□ 0.23
ZIC3O60481 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.51■□□□□ 0.23
ZIC3O60481 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.51■□□□□ 0.23
ZIC3O60481 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.51■□□□□ 0.23
ZIC3O60481 TSPY22P-201ENST00000427496 604 ntBASIC16.51■□□□□ 0.23
ZIC3O60481 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.51■□□□□ 0.23
ZIC3O60481 AL390719.2-201ENST00000606993 987 ntBASIC16.51■□□□□ 0.23
ZIC3O60481 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZIC3O60481 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.51■□□□□ 0.23
ZIC3O60481 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ZIC3O60481 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.51■□□□□ 0.23
ZIC3O60481 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZIC3O60481 GMCL1P1-201ENST00000463439 1581 ntBASIC16.51■□□□□ 0.23
ZIC3O60481 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZIC3O60481 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZIC3O60481 AC016734.2-201ENST00000624325 1377 ntBASIC16.51■□□□□ 0.23
ZIC3O60481 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZIC3O60481 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.5■□□□□ 0.23
ZIC3O60481 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.5■□□□□ 0.23
ZIC3O60481 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.5■□□□□ 0.23
ZIC3O60481 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.5■□□□□ 0.23
ZIC3O60481 KRT8P26-201ENST00000534154 1276 ntBASIC16.5■□□□□ 0.23
ZIC3O60481 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.5■□□□□ 0.23
ZIC3O60481 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.5■□□□□ 0.23
ZIC3O60481 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 GPR32P1-201ENST00000601788 811 ntBASIC16.5■□□□□ 0.23
ZIC3O60481 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.5■□□□□ 0.23
ZIC3O60481 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.5■□□□□ 0.23
ZIC3O60481 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZIC3O60481 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
ZIC3O60481 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ZIC3O60481 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ZIC3O60481 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.49■□□□□ 0.23
ZIC3O60481 ESPNP-201ENST00000270691 2015 ntBASIC16.49■□□□□ 0.23
ZIC3O60481 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZIC3O60481 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.49■□□□□ 0.23
ZIC3O60481 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
ZIC3O60481 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ZIC3O60481 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 BX276092.5-203ENST00000456199 560 ntBASIC16.49■□□□□ 0.23
ZIC3O60481 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.49■□□□□ 0.23
ZIC3O60481 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 AC113404.2-201ENST00000507884 177 ntBASIC16.49■□□□□ 0.23
ZIC3O60481 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.49■□□□□ 0.23
ZIC3O60481 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZIC3O60481 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.49■□□□□ 0.23
ZIC3O60481 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.49■□□□□ 0.23
ZIC3O60481 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms