Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PEX1O43933 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PEX1O43933 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PEX1O43933 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PEX1O43933 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.94■□□□□ 0.46
PEX1O43933 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
PEX1O43933 NIFKP9-201ENST00000419265 221 ntBASIC17.94■□□□□ 0.46
PEX1O43933 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.94■□□□□ 0.46
PEX1O43933 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PEX1O43933 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.94■□□□□ 0.46
PEX1O43933 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.94■□□□□ 0.46
PEX1O43933 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.94■□□□□ 0.46
PEX1O43933 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 PCDHA12-202ENST00000613593 2588 ntBASIC17.94■□□□□ 0.46
PEX1O43933 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PEX1O43933 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.94■□□□□ 0.46
PEX1O43933 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PEX1O43933 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PEX1O43933 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PEX1O43933 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PEX1O43933 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
PEX1O43933 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.93■□□□□ 0.46
PEX1O43933 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PEX1O43933 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
PEX1O43933 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 TNRC18P3-201ENST00000441896 2691 ntBASIC17.93■□□□□ 0.46
PEX1O43933 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 TUBB8P6-201ENST00000436895 1288 ntBASIC17.93■□□□□ 0.46
PEX1O43933 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.93■□□□□ 0.46
PEX1O43933 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.93■□□□□ 0.46
PEX1O43933 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.93■□□□□ 0.46
PEX1O43933 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.93■□□□□ 0.46
PEX1O43933 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.93■□□□□ 0.46
PEX1O43933 AC012317.2-201ENST00000623305 2251 ntBASIC17.93■□□□□ 0.46
PEX1O43933 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.93■□□□□ 0.46
PEX1O43933 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PEX1O43933 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PEX1O43933 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.92■□□□□ 0.46
PEX1O43933 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.92■□□□□ 0.46
PEX1O43933 KRT18P16-201ENST00000510337 1294 ntBASIC17.92■□□□□ 0.46
PEX1O43933 NUDT16P1-203ENST00000513809 620 ntBASIC17.92■□□□□ 0.46
PEX1O43933 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.92■□□□□ 0.46
PEX1O43933 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.92■□□□□ 0.46
PEX1O43933 C1QL1P1-201ENST00000568105 661 ntBASIC17.92■□□□□ 0.46
PEX1O43933 LINC01023-201ENST00000606054 436 ntBASIC17.92■□□□□ 0.46
PEX1O43933 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.92■□□□□ 0.46
PEX1O43933 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.92■□□□□ 0.46
PEX1O43933 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PEX1O43933 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PEX1O43933 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.92■□□□□ 0.46
PEX1O43933 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.92■□□□□ 0.46
PEX1O43933 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.91■□□□□ 0.46
PEX1O43933 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PEX1O43933 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms