Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A2O43868 WIZP1-201ENST00000531444 2299 ntBASIC17.72■□□□□ 0.43
SLC28A2O43868 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A2O43868 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A2O43868 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A2O43868 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC28A2O43868 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.72■□□□□ 0.43
SLC28A2O43868 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SLC28A2O43868 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 AC104581.1-202ENST00000635932 2618 ntBASIC17.72■□□□□ 0.43
SLC28A2O43868 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC28A2O43868 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC28A2O43868 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC28A2O43868 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.71■□□□□ 0.43
SLC28A2O43868 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A2O43868 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SLC28A2O43868 AC009078.2-202ENST00000463353 338 ntBASIC17.71■□□□□ 0.43
SLC28A2O43868 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC28A2O43868 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC28A2O43868 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC28A2O43868 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC28A2O43868 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A2O43868 NPAP1P7-201ENST00000613027 823 ntBASIC17.71■□□□□ 0.43
SLC28A2O43868 AC083906.6-201ENST00000641366 219 ntBASIC17.71■□□□□ 0.43
SLC28A2O43868 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A2O43868 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC28A2O43868 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC28A2O43868 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC28A2O43868 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC28A2O43868 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC28A2O43868 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC28A2O43868 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SLC28A2O43868 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC28A2O43868 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC28A2O43868 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC28A2O43868 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC28A2O43868 UNC93B7-201ENST00000509439 705 ntBASIC17.7■□□□□ 0.42
SLC28A2O43868 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC28A2O43868 AC139530.3-201ENST00000620344 690 ntBASIC17.7■□□□□ 0.42
SLC28A2O43868 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 LINC01311-201ENST00000565162 1445 ntBASIC17.7■□□□□ 0.42
SLC28A2O43868 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SLC28A2O43868 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A2O43868 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC28A2O43868 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms