Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
MSH5O43196 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
MSH5O43196 AL390961.4-201ENST00000623958 2535 ntBASIC24.99■■□□□ 1.59
MSH5O43196 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.98■■□□□ 1.59
MSH5O43196 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.98■■□□□ 1.59
MSH5O43196 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.98■■□□□ 1.59
MSH5O43196 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.98■■□□□ 1.59
MSH5O43196 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.98■■□□□ 1.59
MSH5O43196 AC092338.2-201ENST00000568827 1415 ntBASIC24.98■■□□□ 1.59
MSH5O43196 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
MSH5O43196 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
MSH5O43196 MTND4P6-201ENST00000438297 472 ntBASIC24.98■■□□□ 1.59
MSH5O43196 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.98■■□□□ 1.59
MSH5O43196 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.98■■□□□ 1.59
MSH5O43196 AC114878.2-201ENST00000604863 1251 ntBASIC24.98■■□□□ 1.59
MSH5O43196 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC24.98■■□□□ 1.59
MSH5O43196 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
MSH5O43196 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.98■■□□□ 1.59
MSH5O43196 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MSH5O43196 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
MSH5O43196 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
MSH5O43196 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 AC096733.2-201ENST00000609937 1394 ntBASIC24.97■■□□□ 1.59
MSH5O43196 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.97■■□□□ 1.59
MSH5O43196 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 RNU4-40P-201ENST00000364351 143 ntBASIC24.97■■□□□ 1.59
MSH5O43196 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC24.97■■□□□ 1.59
MSH5O43196 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 AC098826.2-201ENST00000452011 651 ntBASIC24.97■■□□□ 1.59
MSH5O43196 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.97■■□□□ 1.59
MSH5O43196 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC24.97■■□□□ 1.59
MSH5O43196 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.97■■□□□ 1.59
MSH5O43196 AC091057.3-201ENST00000602684 733 ntBASIC24.97■■□□□ 1.59
MSH5O43196 AL049536.1-201ENST00000625043 744 ntBASIC24.97■■□□□ 1.59
MSH5O43196 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
MSH5O43196 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC24.97■■□□□ 1.59
MSH5O43196 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
MSH5O43196 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
MSH5O43196 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MSH5O43196 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.96■■□□□ 1.59
MSH5O43196 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.96■■□□□ 1.59
MSH5O43196 TREX1-205ENST00000625293 1783 ntBASIC24.96■■□□□ 1.59
MSH5O43196 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
MSH5O43196 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
MSH5O43196 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC24.96■■□□□ 1.59
MSH5O43196 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC24.96■■□□□ 1.59
MSH5O43196 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.96■■□□□ 1.59
MSH5O43196 AC253576.1-201ENST00000511645 1156 ntBASIC24.96■■□□□ 1.59
MSH5O43196 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.96■■□□□ 1.59
MSH5O43196 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.96■■□□□ 1.59
MSH5O43196 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC24.96■■□□□ 1.59
MSH5O43196 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC24.96■■□□□ 1.59
MSH5O43196 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MSH5O43196 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC24.95■■□□□ 1.59
MSH5O43196 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
MSH5O43196 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
MSH5O43196 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
MSH5O43196 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MSH5O43196 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MSH5O43196 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms