Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLOCKO15516 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.47■□□□□ 0.39
CLOCKO15516 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.47■□□□□ 0.39
CLOCKO15516 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.47■□□□□ 0.39
CLOCKO15516 MIR718-201ENST00000390190 70 ntBASIC17.47■□□□□ 0.39
CLOCKO15516 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 TSPY23P-201ENST00000440136 739 ntBASIC17.47■□□□□ 0.39
CLOCKO15516 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.47■□□□□ 0.39
CLOCKO15516 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.47■□□□□ 0.39
CLOCKO15516 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.47■□□□□ 0.39
CLOCKO15516 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.47■□□□□ 0.39
CLOCKO15516 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLOCKO15516 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.47■□□□□ 0.39
CLOCKO15516 AC012317.2-201ENST00000623305 2251 ntBASIC17.47■□□□□ 0.39
CLOCKO15516 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLOCKO15516 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLOCKO15516 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 AC124067.4-201ENST00000519691 2379 ntBASIC17.46■□□□□ 0.39
CLOCKO15516 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 AC093677.2-201ENST00000600169 1863 ntBASIC17.46■□□□□ 0.39
CLOCKO15516 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.46■□□□□ 0.39
CLOCKO15516 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CLOCKO15516 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 AL596275.1-201ENST00000423464 877 ntBASIC17.46■□□□□ 0.39
CLOCKO15516 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CLOCKO15516 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.46■□□□□ 0.39
CLOCKO15516 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
CLOCKO15516 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.46■□□□□ 0.39
CLOCKO15516 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.46■□□□□ 0.39
CLOCKO15516 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CLOCKO15516 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CLOCKO15516 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CLOCKO15516 AL139384.1-201ENST00000612143 3047 ntBASIC17.46■□□□□ 0.39
CLOCKO15516 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 MTMR9LP-203ENST00000426597 1545 ntBASIC17.46■□□□□ 0.39
CLOCKO15516 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLOCKO15516 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
CLOCKO15516 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CLOCKO15516 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLOCKO15516 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLOCKO15516 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLOCKO15516 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLOCKO15516 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
CLOCKO15516 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.45■□□□□ 0.38
CLOCKO15516 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CLOCKO15516 RCC2P6-201ENST00000526625 1557 ntBASIC17.45■□□□□ 0.38
CLOCKO15516 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLOCKO15516 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CLOCKO15516 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLOCKO15516 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.45■□□□□ 0.38
CLOCKO15516 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.45■□□□□ 0.38
CLOCKO15516 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLOCKO15516 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CLOCKO15516 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.45■□□□□ 0.38
CLOCKO15516 AL121829.2-201ENST00000620908 328 ntBASIC17.45■□□□□ 0.38
CLOCKO15516 AL023875.1-201ENST00000640777 796 ntBASIC17.45■□□□□ 0.38
CLOCKO15516 MYC-208ENST00000641036 567 ntBASIC17.45■□□□□ 0.38
CLOCKO15516 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms