Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SDHAP2-201ENST00000455183 2001 ntBASIC20.66■□□□□ 0.9
DDX39AO00148 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDX39AO00148 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX39AO00148 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX39AO00148 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX39AO00148 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
DDX39AO00148 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX39AO00148 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX39AO00148 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 AC016734.2-201ENST00000624325 1377 ntBASIC20.65■□□□□ 0.9
DDX39AO00148 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX39AO00148 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DDX39AO00148 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DDX39AO00148 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
DDX39AO00148 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX39AO00148 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.65■□□□□ 0.9
DDX39AO00148 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.65■□□□□ 0.9
DDX39AO00148 AC005332.3-201ENST00000589904 676 ntBASIC20.65■□□□□ 0.9
DDX39AO00148 AL121672.3-201ENST00000608644 468 ntBASIC20.65■□□□□ 0.9
DDX39AO00148 AC092119.3-201ENST00000612618 583 ntBASIC20.65■□□□□ 0.9
DDX39AO00148 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDX39AO00148 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
DDX39AO00148 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX39AO00148 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DDX39AO00148 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
DDX39AO00148 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.64■□□□□ 0.9
DDX39AO00148 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.64■□□□□ 0.9
DDX39AO00148 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX39AO00148 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX39AO00148 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.64■□□□□ 0.89
DDX39AO00148 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 TSSC2-201ENST00000450217 709 ntBASIC20.64■□□□□ 0.89
DDX39AO00148 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 KRT18P56-201ENST00000507275 550 ntBASIC20.64■□□□□ 0.89
DDX39AO00148 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.64■□□□□ 0.89
DDX39AO00148 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX39AO00148 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX39AO00148 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DDX39AO00148 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
DDX39AO00148 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX39AO00148 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 AC093503.3-201ENST00000624917 2352 ntBASIC20.63■□□□□ 0.89
DDX39AO00148 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.63■□□□□ 0.89
DDX39AO00148 KRT8P26-201ENST00000534154 1276 ntBASIC20.63■□□□□ 0.89
DDX39AO00148 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.63■□□□□ 0.89
DDX39AO00148 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DDX39AO00148 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX39AO00148 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX39AO00148 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
DDX39AO00148 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX39AO00148 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
DDX39AO00148 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX39AO00148 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.62■□□□□ 0.89
DDX39AO00148 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX39AO00148 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms