Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.27■□□□□ 0.19
NPIPB4C9JG80 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPB4C9JG80 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.27■□□□□ 0.19
NPIPB4C9JG80 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NPIPB4C9JG80 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NPIPB4C9JG80 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.26■□□□□ 0.19
NPIPB4C9JG80 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 AC141257.4-201ENST00000634557 245 ntBASIC16.26■□□□□ 0.19
NPIPB4C9JG80 AC136944.6-201ENST00000634818 245 ntBASIC16.26■□□□□ 0.19
NPIPB4C9JG80 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 AC007613.1-201ENST00000572811 2597 ntBASIC16.26■□□□□ 0.19
NPIPB4C9JG80 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPIPB4C9JG80 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 SLC25A3P1-201ENST00000443844 931 ntBASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AC034232.1-201ENST00000506026 1064 ntBASIC16.25■□□□□ 0.19
NPIPB4C9JG80 DUTP2-201ENST00000519164 463 ntBASIC16.25■□□□□ 0.19
NPIPB4C9JG80 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AL031432.5-201ENST00000641059 760 ntBASIC16.25■□□□□ 0.19
NPIPB4C9JG80 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.25■□□□□ 0.19
NPIPB4C9JG80 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms