Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 SAPCD2P3-201ENST00000455031 850 ntBASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 AP002469.2-201ENST00000531724 424 ntBASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC144AA2RUR9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCDC144AA2RUR9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
CCDC144AA2RUR9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CCDC144AA2RUR9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.8
CCDC144AA2RUR9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 AL160237.2-201ENST00000556165 472 ntBASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 LINC00602-201ENST00000629776 2065 ntBASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC144AA2RUR9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 AC068472.1-201ENST00000474589 881 ntBASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 AC106795.1-205ENST00000512851 1056 ntBASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 SLC25A6P4-201ENST00000586535 553 ntBASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 AL121912.1-201ENST00000603683 238 ntBASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 AP000347.1-202ENST00000435868 847 ntBASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC144AA2RUR9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 POM121L3P-201ENST00000419331 1163 ntBASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CCDC144AA2RUR9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC144AA2RUR9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC144AA2RUR9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms