Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SHISA3A0PJX4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 NBPF21P-201ENST00000425093 1451 ntBASIC16.04■□□□□ 0.16
SHISA3A0PJX4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.04■□□□□ 0.16
SHISA3A0PJX4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 AC092437.1-201ENST00000624794 1048 ntBASIC16.04■□□□□ 0.16
SHISA3A0PJX4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHISA3A0PJX4 AL118508.1-201ENST00000613502 2345 ntBASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AC083906.2-201ENST00000511578 360 ntBASIC16.03■□□□□ 0.16
SHISA3A0PJX4 PRSS44-201ENST00000515154 1146 ntBASIC16.03■□□□□ 0.16
SHISA3A0PJX4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 AC083880.1-201ENST00000608266 535 ntBASIC16.03■□□□□ 0.16
SHISA3A0PJX4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA3A0PJX4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 UBALD1-205ENST00000590891 2641 ntBASIC16.02■□□□□ 0.16
SHISA3A0PJX4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.02■□□□□ 0.16
SHISA3A0PJX4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 AC097658.1-201ENST00000475555 843 ntBASIC16.02■□□□□ 0.16
SHISA3A0PJX4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA3A0PJX4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms