Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 LINC01126-201ENST00000623515 1646 ntBASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 KRT18P22-201ENST00000402024 1347 ntBASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AL096828.2-201ENST00000567259 1965 ntBASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NOC2LP2-201ENST00000407594 1944 ntBASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ECEL1P3-201ENST00000427961 737 ntBASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC010240.3-201ENST00000607688 395 ntBASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC067852.2-201ENST00000590513 2313 ntBASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV1D-43A0A0B4J1Z2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms