Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 NKILA-202ENST00000614771 2598 ntBASIC17.42■□□□□ 0.38
AP4S1Q9Y587 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4S1Q9Y587 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4S1Q9Y587 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 AC011676.5-201ENST00000624864 2660 ntBASIC17.4■□□□□ 0.38
AP4S1Q9Y587 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 AC034268.1-201ENST00000441047 882 ntBASIC17.4■□□□□ 0.38
AP4S1Q9Y587 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 AL096828.2-201ENST00000567259 1965 ntBASIC17.4■□□□□ 0.38
AP4S1Q9Y587 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 MYLKP1-201ENST00000509077 1580 ntBASIC17.4■□□□□ 0.38
AP4S1Q9Y587 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 AC006116.8-202ENST00000587620 1550 ntBASIC17.4■□□□□ 0.38
AP4S1Q9Y587 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4S1Q9Y587 AL023806.1-201ENST00000603994 1649 ntBASIC17.39■□□□□ 0.38
AP4S1Q9Y587 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.39■□□□□ 0.37
AP4S1Q9Y587 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4S1Q9Y587 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms