Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 AL359075.1-203ENST00000462729 1002 ntBASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 AC112497.1-201ENST00000624824 639 ntBASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.88■□□□□ 0.29
RPH3AQ9Y2J0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 AL031598.1-201ENST00000561511 1773 ntBASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 AC022616.7-201ENST00000525383 220 ntBASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 AC091076.1-201ENST00000610741 619 ntBASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 AC034236.2-201ENST00000606662 1610 ntBASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPH3AQ9Y2J0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 AL138781.2-201ENST00000617896 1843 ntBASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 AC063952.2-201ENST00000498792 1227 ntBASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 AC090340.1-201ENST00000620778 4980 ntBASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 AC099343.3-201ENST00000605834 2503 ntBASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
RPH3AQ9Y2J0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms