Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 HYMAI.1-201ENST00000620949 238 ntBASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 AC012313.10-201ENST00000623509 926 ntBASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 AL512353.2-201ENST00000448759 1962 ntBASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 GCSHP2-201ENST00000560971 527 ntBASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 KRT8P3-201ENST00000519669 1449 ntBASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.8■□□□□ 0.6
FNDC3AQ9Y2H6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 BX323043.1-201ENST00000641006 1765 ntBASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 STARP1-201ENST00000397973 869 ntBASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FNDC3AQ9Y2H6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 LINC01311-201ENST00000565162 1445 ntBASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 SPDYE15P-201ENST00000424157 909 ntBASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 NEK4P2-201ENST00000580004 1012 ntBASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms