Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPG7Q9UQ90 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPG7Q9UQ90 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPG7Q9UQ90 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPG7Q9UQ90 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPG7Q9UQ90 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SPG7Q9UQ90 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24■■□□□ 1.43
SPG7Q9UQ90 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SPG7Q9UQ90 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SPG7Q9UQ90 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SPG7Q9UQ90 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
SPG7Q9UQ90 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SPG7Q9UQ90 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC24■■□□□ 1.43
SPG7Q9UQ90 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24■■□□□ 1.43
SPG7Q9UQ90 AL773604.1-201ENST00000617417 272 ntBASIC24■■□□□ 1.43
SPG7Q9UQ90 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SPG7Q9UQ90 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24■■□□□ 1.43
SPG7Q9UQ90 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC24■■□□□ 1.43
SPG7Q9UQ90 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPG7Q9UQ90 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
SPG7Q9UQ90 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPG7Q9UQ90 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 AC132008.2-207ENST00000454517 770 ntBASIC23.98■■□□□ 1.43
SPG7Q9UQ90 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 GPALPP1-207ENST00000611650 899 ntBASIC23.98■■□□□ 1.43
SPG7Q9UQ90 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPG7Q9UQ90 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPG7Q9UQ90 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPG7Q9UQ90 KRT18P67-201ENST00000432816 1264 ntBASIC23.97■■□□□ 1.43
SPG7Q9UQ90 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SPG7Q9UQ90 AC068472.1-201ENST00000474589 881 ntBASIC23.97■■□□□ 1.43
SPG7Q9UQ90 AC005336.2-201ENST00000593183 939 ntBASIC23.97■■□□□ 1.43
SPG7Q9UQ90 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SPG7Q9UQ90 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.97■■□□□ 1.43
SPG7Q9UQ90 SDHAP2-201ENST00000455183 2001 ntBASIC23.96■■□□□ 1.43
SPG7Q9UQ90 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 MYLKP1-201ENST00000509077 1580 ntBASIC23.96■■□□□ 1.43
SPG7Q9UQ90 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 AL671883.3-201ENST00000603274 991 ntBASIC23.96■■□□□ 1.43
SPG7Q9UQ90 AC006538.3-201ENST00000612495 578 ntBASIC23.96■■□□□ 1.43
SPG7Q9UQ90 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SPG7Q9UQ90 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms