Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGC3Q9UN70 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 KRT18P57-201ENST00000443599 1254 ntBASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGC3Q9UN70 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 RASA4DP-201ENST00000460726 1199 ntBASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 AC006011.2-201ENST00000621313 1158 ntBASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGC3Q9UN70 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHGC3Q9UN70 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 STARP1-201ENST00000397973 869 ntBASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGC3Q9UN70 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 RCN1P1-201ENST00000400413 996 ntBASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms