Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 AP002414.4-201ENST00000589764 1148 ntBASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 AC093525.10-201ENST00000625130 1569 ntBASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NOTCH3Q9UM47 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 AC112497.1-201ENST00000624824 639 ntBASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 AL136038.4-201ENST00000603606 1261 ntBASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NOTCH3Q9UM47 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.21□□□□□ -0.14
NOTCH3Q9UM47 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 TOB2P1-201ENST00000469761 992 ntBASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 AL662844.1-201ENST00000546340 181 ntBASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NOTCH3Q9UM47 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms