Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 CHCHD2P8-201ENST00000429873 447 ntBASIC19.41■□□□□ 0.7
CDH9Q9ULB4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 AC126763.1-201ENST00000552015 2118 ntBASIC19.41■□□□□ 0.7
CDH9Q9ULB4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 NPAP1P7-201ENST00000613027 823 ntBASIC19.41■□□□□ 0.7
CDH9Q9ULB4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH9Q9ULB4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 AC005082.1-201ENST00000413042 2259 ntBASIC19.4■□□□□ 0.7
CDH9Q9ULB4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 AC113404.2-201ENST00000507884 177 ntBASIC19.4■□□□□ 0.7
CDH9Q9ULB4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 TNXA-203ENST00000507684 2038 ntBASIC19.4■□□□□ 0.7
CDH9Q9ULB4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH9Q9ULB4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH9Q9ULB4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CDH9Q9ULB4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 AL353692.3-201ENST00000407031 1396 ntBASIC19.39■□□□□ 0.69
CDH9Q9ULB4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 AC073592.3-201ENST00000625118 1834 ntBASIC19.39■□□□□ 0.69
CDH9Q9ULB4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH9Q9ULB4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms