Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 KRT8P26-201ENST00000534154 1276 ntBASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 PRELID1P1-202ENST00000567272 903 ntBASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 MIR662-201ENST00000384847 95 ntBASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 AP002414.4-201ENST00000589764 1148 ntBASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDAC6Q9UBN7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 AC093525.10-201ENST00000625130 1569 ntBASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 KRT18P23-201ENST00000435622 1283 ntBASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.77■□□□□ 0.92
HDAC6Q9UBN7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HDAC6Q9UBN7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HDAC6Q9UBN7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
HDAC6Q9UBN7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HDAC6Q9UBN7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.77■□□□□ 0.91
HDAC6Q9UBN7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 AC006333.2-201ENST00000607957 2099 ntBASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
HDAC6Q9UBN7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HDAC6Q9UBN7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms