Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 RN7SL850P-201ENST00000579959 291 ntBASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 AC112497.1-201ENST00000624824 639 ntBASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPARGC1AQ9UBK2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 AP000593.1-201ENST00000393668 712 ntBASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 ANO7L1-203ENST00000602586 1720 ntBASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PPARGC1AQ9UBK2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 TMPOP1-202ENST00000424642 1267 ntBASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 KRT18P23-201ENST00000435622 1283 ntBASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 AC006011.2-201ENST00000621313 1158 ntBASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 MYC-208ENST00000641036 567 ntBASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 AC112777.1-201ENST00000540175 1423 ntBASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.16■□□□□ 0.66
PPARGC1AQ9UBK2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms