Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MINOS1P3-201ENST00000457048 203 ntBASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 AF238378.1-201ENST00000526806 358 ntBASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3BQ9UBC3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 SAPCD2P3-201ENST00000455031 850 ntBASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 HLA-A-201ENST00000376802 1334 ntBASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3BQ9UBC3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3BQ9UBC3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 AL049812.1-201ENST00000432563 2267 ntBASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 POM121L3P-201ENST00000419331 1163 ntBASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 TSPY12P-201ENST00000421279 868 ntBASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 BNIP3P18-201ENST00000593976 575 ntBASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DNMT3BQ9UBC3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms