Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 RCC2P3-201ENST00000418112 1537 ntBASIC18.23■□□□□ 0.51
NCDNQ9UBB6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 SART3-203ENST00000546611 1184 ntBASIC18.22■□□□□ 0.51
NCDNQ9UBB6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 AC002347.1-201ENST00000569543 541 ntBASIC18.22■□□□□ 0.51
NCDNQ9UBB6 MIR3180-4-201ENST00000582223 153 ntBASIC18.22■□□□□ 0.51
NCDNQ9UBB6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCDNQ9UBB6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 AC211486.1-202ENST00000416371 468 ntBASIC18.21■□□□□ 0.51
NCDNQ9UBB6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 AC211476.1-201ENST00000503899 468 ntBASIC18.21■□□□□ 0.51
NCDNQ9UBB6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 AC008556.1-201ENST00000610908 2040 ntBASIC18.21■□□□□ 0.51
NCDNQ9UBB6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCDNQ9UBB6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NCDNQ9UBB6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
NCDNQ9UBB6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.21■□□□□ 0.5
NCDNQ9UBB6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 CYMP-203ENST00000474680 1263 ntBASIC18.2■□□□□ 0.5
NCDNQ9UBB6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 AC239800.4-201ENST00000603712 296 ntBASIC18.2■□□□□ 0.5
NCDNQ9UBB6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 AL596442.2-201ENST00000610240 980 ntBASIC18.2■□□□□ 0.5
NCDNQ9UBB6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
NCDNQ9UBB6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms