Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXC10Q9NYD6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 AC114341.1-201ENST00000618070 349 ntBASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 AC005332.7-201ENST00000614046 2005 ntBASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC10Q9NYD6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 BX640515.1-201ENST00000617215 977 ntBASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC10Q9NYD6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 FAM197Y8-203ENST00000450145 560 ntBASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 AC132008.2-207ENST00000454517 770 ntBASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC10Q9NYD6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HOXC10Q9NYD6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HOXC10Q9NYD6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.02■□□□□ 0.95
HOXC10Q9NYD6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 AL024508.2-201ENST00000607749 1894 ntBASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 AC096582.2-201ENST00000510860 516 ntBASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC10Q9NYD6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 MOK-208ENST00000519058 917 ntTSL 2 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 AC009154.2-201ENST00000621177 724 ntBASIC21■□□□□ 0.95
HOXC10Q9NYD6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms