Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 AC144831.1-201ENST00000573312 2656 ntBASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 AGGF1P2-201ENST00000426656 2106 ntBASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 AL161772.1-201ENST00000610494 4412 ntBASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 TNRC18P2-201ENST00000417666 2714 ntBASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDC42SE1Q9NRR8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 AL023775.1-201ENST00000454907 1746 ntBASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms