Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 AC079598.2-202ENST00000546624 1451 ntBASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTPS2Q9NRF8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 AC096733.2-201ENST00000609937 1394 ntBASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 AC068880.1-201ENST00000507289 2297 ntBASIC17.16■□□□□ 0.34
CTPS2Q9NRF8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 UNC93B2-201ENST00000285383 730 ntBASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 CRYGFP-201ENST00000418459 633 ntBASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 RBM17P1-201ENST00000453646 1190 ntBASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 KRT17P2-201ENST00000300992 1314 ntBASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTPS2Q9NRF8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTPS2Q9NRF8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 AC067852.2-201ENST00000590513 2313 ntBASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 AL355075.4-201ENST00000554988 638 ntBASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 AC135776.1-201ENST00000319817 2481 ntBASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTPS2Q9NRF8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms