Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 GPX1P1-201ENST00000388829 606 ntBASIC16.75■□□□□ 0.27
HMG20AQ9NP66 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.75■□□□□ 0.27
HMG20AQ9NP66 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.74■□□□□ 0.27
HMG20AQ9NP66 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20AQ9NP66 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 AL121832.2-201ENST00000610979 668 ntBASIC16.73■□□□□ 0.27
HMG20AQ9NP66 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20AQ9NP66 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 AL121761.2-201ENST00000598007 1648 ntBASIC16.72■□□□□ 0.27
HMG20AQ9NP66 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMG20AQ9NP66 AC006970.2-201ENST00000450065 779 ntBASIC16.72■□□□□ 0.27
HMG20AQ9NP66 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms