Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDT1Q9H211 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CDT1Q9H211 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.89■□□□□ 0.77
CDT1Q9H211 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CDT1Q9H211 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.89■□□□□ 0.77
CDT1Q9H211 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.89■□□□□ 0.77
CDT1Q9H211 CHCHD2P8-201ENST00000429873 447 ntBASIC19.89■□□□□ 0.77
CDT1Q9H211 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.89■□□□□ 0.77
CDT1Q9H211 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
CDT1Q9H211 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.89■□□□□ 0.77
CDT1Q9H211 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDT1Q9H211 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.89■□□□□ 0.77
CDT1Q9H211 AC092119.3-201ENST00000612618 583 ntBASIC19.89■□□□□ 0.77
CDT1Q9H211 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.89■□□□□ 0.77
CDT1Q9H211 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.89■□□□□ 0.77
CDT1Q9H211 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.89■□□□□ 0.77
CDT1Q9H211 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CDT1Q9H211 AC073592.3-201ENST00000625118 1834 ntBASIC19.88■□□□□ 0.77
CDT1Q9H211 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDT1Q9H211 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CDT1Q9H211 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDT1Q9H211 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.88■□□□□ 0.77
CDT1Q9H211 HCG4P8-203ENST00000443049 980 ntBASIC19.88■□□□□ 0.77
CDT1Q9H211 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.88■□□□□ 0.77
CDT1Q9H211 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.88■□□□□ 0.77
CDT1Q9H211 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDT1Q9H211 AC004263.2-201ENST00000617183 678 ntBASIC19.88■□□□□ 0.77
CDT1Q9H211 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.88■□□□□ 0.77
CDT1Q9H211 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.88■□□□□ 0.77
CDT1Q9H211 WIZP1-201ENST00000531444 2299 ntBASIC19.88■□□□□ 0.77
CDT1Q9H211 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDT1Q9H211 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
CDT1Q9H211 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.87■□□□□ 0.77
CDT1Q9H211 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.87■□□□□ 0.77
CDT1Q9H211 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CDT1Q9H211 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CDT1Q9H211 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
CDT1Q9H211 AL353692.3-201ENST00000407031 1396 ntBASIC19.87■□□□□ 0.77
CDT1Q9H211 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CDT1Q9H211 MIR3180-1-201ENST00000580374 94 ntBASIC19.87■□□□□ 0.77
CDT1Q9H211 MIR3180-3-201ENST00000584616 94 ntBASIC19.87■□□□□ 0.77
CDT1Q9H211 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDT1Q9H211 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.87■□□□□ 0.77
CDT1Q9H211 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.86■□□□□ 0.77
CDT1Q9H211 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDT1Q9H211 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.86■□□□□ 0.77
CDT1Q9H211 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDT1Q9H211 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.86■□□□□ 0.77
CDT1Q9H211 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.86■□□□□ 0.77
CDT1Q9H211 AC113404.2-201ENST00000507884 177 ntBASIC19.86■□□□□ 0.77
CDT1Q9H211 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.86■□□□□ 0.77
CDT1Q9H211 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms