Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.51■□□□□ 0.39
CNTNAP3Q9BZ76 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 SIGLEC30P-201ENST00000455569 941 ntBASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 MIR3180-5-201ENST00000583743 153 ntBASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 AC027612.4-201ENST00000605371 583 ntBASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 MIR6752-201ENST00000618442 71 ntBASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3Q9BZ76 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 AL391422.3-201ENST00000603791 2761 ntBASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 OR8S1-201ENST00000310194 1080 ntBASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 TSEN15P1-201ENST00000423257 515 ntBASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3Q9BZ76 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AL023284.2-201ENST00000405850 579 ntBASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AC005498.2-205ENST00000593218 784 ntBASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AC064836.3-201ENST00000607928 673 ntBASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AC008735.5-201ENST00000623544 497 ntBASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3Q9BZ76 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms