Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 BX005266.1-201ENST00000473402 457 ntBASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 AC067863.1-201ENST00000494933 530 ntBASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 MIR4751-201ENST00000578027 74 ntBASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 AL358472.5-202ENST00000641448 1267 ntBASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 AC009237.14-201ENST00000609975 1594 ntBASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 C9orf163-202ENST00000624034 2573 ntBASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 AC105339.1-204ENST00000636249 355 ntBASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 AL022326.1-202ENST00000641533 845 ntBASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN3Q9BTN0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 AC023141.5-201ENST00000458585 616 ntBASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 AC015911.4-201ENST00000588022 1070 ntBASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 LINC02560-201ENST00000596379 459 ntBASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 AC008761.3-201ENST00000624803 892 ntBASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 ZNF815P-204ENST00000434898 1737 ntBASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN3Q9BTN0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 AC055876.3-201ENST00000431496 288 ntBASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 FAM207CP-201ENST00000443486 507 ntBASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 AC138649.4-201ENST00000612222 287 ntBASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRFN3Q9BTN0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRFN3Q9BTN0 SDHAP1-207ENST00000440850 2000 ntBASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms