Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VPS25Q9BRG1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 REXO1L9P-201ENST00000604264 2108 ntBASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 AC004448.1-201ENST00000458332 883 ntBASIC12.85□□□□□ -0.35
VPS25Q9BRG1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 AC100803.2-201ENST00000562459 1963 ntBASIC12.85□□□□□ -0.35
VPS25Q9BRG1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS25Q9BRG1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 AL009178.2-201ENST00000597278 2719 ntBASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 Z98044.1-201ENST00000632503 1764 ntBASIC12.84□□□□□ -0.35
VPS25Q9BRG1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 AC105020.1-201ENST00000435356 2205 ntBASIC12.84□□□□□ -0.35
VPS25Q9BRG1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS25Q9BRG1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VPS25Q9BRG1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
VPS25Q9BRG1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.83□□□□□ -0.35
VPS25Q9BRG1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.83□□□□□ -0.35
VPS25Q9BRG1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms