Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 MCCD1P2-201ENST00000423228 335 ntBASIC24.41■■□□□ 1.5
ABCA3Q99758 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.4■■□□□ 1.5
ABCA3Q99758 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 AC254562.1-201ENST00000417586 456 ntBASIC24.4■■□□□ 1.5
ABCA3Q99758 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC24.4■■□□□ 1.5
ABCA3Q99758 AC008687.5-201ENST00000593746 558 ntBASIC24.4■■□□□ 1.5
ABCA3Q99758 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCA3Q99758 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCA3Q99758 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCA3Q99758 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
ABCA3Q99758 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.39■■□□□ 1.5
ABCA3Q99758 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
ABCA3Q99758 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCA3Q99758 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
ABCA3Q99758 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCA3Q99758 CALY-203ENST00000368558 825 ntTSL 5 BASIC24.39■■□□□ 1.5
ABCA3Q99758 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ABCA3Q99758 ELK2BP-201ENST00000415014 1224 ntBASIC24.39■■□□□ 1.5
ABCA3Q99758 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC24.39■■□□□ 1.5
ABCA3Q99758 CFL1-202ENST00000524553 860 ntTSL 2 BASIC24.39■■□□□ 1.5
ABCA3Q99758 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.39■■□□□ 1.5
ABCA3Q99758 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC24.39■■□□□ 1.5
ABCA3Q99758 ORC5-208ENST00000626700 344 ntTSL 3 BASIC24.39■■□□□ 1.5
ABCA3Q99758 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCA3Q99758 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ABCA3Q99758 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC24.39■■□□□ 1.49
ABCA3Q99758 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
ABCA3Q99758 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCA3Q99758 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCA3Q99758 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC24.38■■□□□ 1.49
ABCA3Q99758 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.38■■□□□ 1.49
ABCA3Q99758 MTDHP5-201ENST00000598980 586 ntBASIC24.38■■□□□ 1.49
ABCA3Q99758 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC24.38■■□□□ 1.49
ABCA3Q99758 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCA3Q99758 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ABCA3Q99758 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ABCA3Q99758 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCA3Q99758 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCA3Q99758 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC24.38■■□□□ 1.49
ABCA3Q99758 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC24.38■■□□□ 1.49
ABCA3Q99758 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.38■■□□□ 1.49
ABCA3Q99758 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.38■■□□□ 1.49
ABCA3Q99758 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.37■■□□□ 1.49
ABCA3Q99758 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC24.37■■□□□ 1.49
ABCA3Q99758 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCA3Q99758 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
ABCA3Q99758 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.37■■□□□ 1.49
ABCA3Q99758 AL035633.1-201ENST00000406139 838 ntBASIC24.37■■□□□ 1.49
ABCA3Q99758 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC24.37■■□□□ 1.49
ABCA3Q99758 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC24.37■■□□□ 1.49
ABCA3Q99758 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
ABCA3Q99758 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC24.37■■□□□ 1.49
ABCA3Q99758 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCA3Q99758 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCA3Q99758 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCA3Q99758 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCA3Q99758 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCA3Q99758 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCA3Q99758 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCA3Q99758 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCA3Q99758 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCA3Q99758 SPCS2P1-201ENST00000561636 679 ntBASIC24.36■■□□□ 1.49
ABCA3Q99758 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC24.36■■□□□ 1.49
ABCA3Q99758 AL596442.2-201ENST00000610240 980 ntBASIC24.36■■□□□ 1.49
ABCA3Q99758 AC083906.6-201ENST00000641366 219 ntBASIC24.36■■□□□ 1.49
ABCA3Q99758 AC079781.4-201ENST00000641908 219 ntBASIC24.36■■□□□ 1.49
ABCA3Q99758 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCA3Q99758 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.36■■□□□ 1.49
ABCA3Q99758 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
ABCA3Q99758 SDHAP2-201ENST00000455183 2001 ntBASIC24.36■■□□□ 1.49
ABCA3Q99758 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCA3Q99758 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCA3Q99758 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ABCA3Q99758 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC24.35■■□□□ 1.49
ABCA3Q99758 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC24.35■■□□□ 1.49
ABCA3Q99758 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
ABCA3Q99758 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC24.35■■□□□ 1.49
ABCA3Q99758 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms