Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC6Q99741 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDC6Q99741 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC6Q99741 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC6Q99741 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC6Q99741 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC6Q99741 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDC6Q99741 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.74■□□□□ 0.43
CDC6Q99741 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC6Q99741 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC6Q99741 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CDC6Q99741 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 FAM215A-202ENST00000632077 792 ntBASIC17.74■□□□□ 0.43
CDC6Q99741 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.74■□□□□ 0.43
CDC6Q99741 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDC6Q99741 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC6Q99741 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC6Q99741 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC6Q99741 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.73■□□□□ 0.43
CDC6Q99741 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CDC6Q99741 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDC6Q99741 MTDHP3-201ENST00000594186 672 ntBASIC17.73■□□□□ 0.43
CDC6Q99741 MIR7706-201ENST00000613747 67 ntBASIC17.73■□□□□ 0.43
CDC6Q99741 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 TREX1-205ENST00000625293 1783 ntBASIC17.73■□□□□ 0.43
CDC6Q99741 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDC6Q99741 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC6Q99741 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC6Q99741 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC6Q99741 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.72■□□□□ 0.43
CDC6Q99741 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDC6Q99741 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC6Q99741 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.72■□□□□ 0.43
CDC6Q99741 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 AC068587.9-201ENST00000641814 219 ntBASIC17.72■□□□□ 0.43
CDC6Q99741 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDC6Q99741 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC6Q99741 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC6Q99741 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDC6Q99741 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC6Q99741 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC6Q99741 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC6Q99741 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDC6Q99741 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.71■□□□□ 0.43
CDC6Q99741 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC6Q99741 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.71■□□□□ 0.43
CDC6Q99741 AC005104.2-201ENST00000427818 678 ntBASIC17.71■□□□□ 0.43
CDC6Q99741 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms