Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 RNF126P1-202ENST00000569893 925 ntBASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 AC090616.6-201ENST00000582640 721 ntBASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 CROCCP3-202ENST00000420820 1947 ntBASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 AC016734.2-201ENST00000624325 1377 ntBASIC19.06■□□□□ 0.64
CDK5RAP1Q96SZ6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK5RAP1Q96SZ6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 AC018445.3-201ENST00000624177 1945 ntBASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 HCG4P8-203ENST00000443049 980 ntBASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK5RAP1Q96SZ6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms