Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AP006288.1-201ENST00000446065 395 ntBASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 KRT18P41-201ENST00000518924 1277 ntBASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 MTDHP5-201ENST00000598980 586 ntBASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 AL139288.1-201ENST00000623748 933 ntBASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM43Q96BQ3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM43Q96BQ3 AL137060.1-201ENST00000618151 2648 ntBASIC19.89■□□□□ 0.78
TRIM43Q96BQ3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 MIR149-201ENST00000384879 89 ntBASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 CYMP-203ENST00000474680 1263 ntBASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 RFPL4AP1-201ENST00000530883 850 ntBASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 AC099343.3-201ENST00000605834 2503 ntBASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 AC009154.2-201ENST00000621177 724 ntBASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM43Q96BQ3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 HEIH-201ENST00000623091 1652 ntBASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms