Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.64■□□□□ 0.73
SHC3Q92529 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.64■□□□□ 0.73
SHC3Q92529 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHC3Q92529 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
SHC3Q92529 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SHC3Q92529 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.63■□□□□ 0.73
SHC3Q92529 AL096828.2-201ENST00000567259 1965 ntBASIC19.63■□□□□ 0.73
SHC3Q92529 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 AL024508.2-201ENST00000607749 1894 ntBASIC19.63■□□□□ 0.73
SHC3Q92529 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.63■□□□□ 0.73
SHC3Q92529 LINC01126-201ENST00000623515 1646 ntBASIC19.63■□□□□ 0.73
SHC3Q92529 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SHC3Q92529 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.63■□□□□ 0.73
SHC3Q92529 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.63■□□□□ 0.73
SHC3Q92529 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SHC3Q92529 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SHC3Q92529 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 REXO1L9P-201ENST00000604264 2108 ntBASIC19.63■□□□□ 0.73
SHC3Q92529 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SHC3Q92529 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.63■□□□□ 0.73
SHC3Q92529 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC3Q92529 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.63■□□□□ 0.73
SHC3Q92529 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SHC3Q92529 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC3Q92529 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 AP000523.1-201ENST00000398242 1049 ntBASIC19.62■□□□□ 0.73
SHC3Q92529 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
SHC3Q92529 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.62■□□□□ 0.73
SHC3Q92529 MIR3917-201ENST00000580971 93 ntBASIC19.62■□□□□ 0.73
SHC3Q92529 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.62■□□□□ 0.73
SHC3Q92529 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHC3Q92529 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC3Q92529 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 NOC2LP2-201ENST00000407594 1944 ntBASIC19.62■□□□□ 0.73
SHC3Q92529 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHC3Q92529 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC3Q92529 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SHC3Q92529 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC3Q92529 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SHC3Q92529 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SHC3Q92529 AC010203.1-204ENST00000548782 407 ntBASIC19.61■□□□□ 0.73
SHC3Q92529 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC3Q92529 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SHC3Q92529 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SHC3Q92529 AC133561.5-201ENST00000635547 218 ntBASIC19.61■□□□□ 0.73
SHC3Q92529 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC3Q92529 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC3Q92529 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC3Q92529 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC3Q92529 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC3Q92529 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC3Q92529 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC3Q92529 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC3Q92529 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC3Q92529 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHC3Q92529 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC3Q92529 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHC3Q92529 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC3Q92529 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC3Q92529 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC3Q92529 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHC3Q92529 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC3Q92529 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SHC3Q92529 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms