Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 KRT8P3-201ENST00000519669 1449 ntBASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.75■□□□□ 0.11
SMIM4Q8WVI0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 KRT8P41-201ENST00000533985 1514 ntBASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 AC018695.7-201ENST00000624587 2492 ntBASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 HLA-A-209ENST00000638375 975 ntBASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMIM4Q8WVI0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 AL139384.1-201ENST00000612143 3047 ntBASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 PHGDH-209ENST00000641074 1780 ntBASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 KRT18P41-201ENST00000518924 1277 ntBASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 AL121832.2-201ENST00000610979 668 ntBASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 GMCL1P1-201ENST00000463439 1581 ntBASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms