Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 MYLKP1-201ENST00000509077 1580 ntBASIC17.12■□□□□ 0.33
CT55Q8WUE5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 AL022342.1-201ENST00000400363 863 ntBASIC17.12■□□□□ 0.33
CT55Q8WUE5 POM121L3P-201ENST00000419331 1163 ntBASIC17.12■□□□□ 0.33
CT55Q8WUE5 TSPY12P-201ENST00000421279 868 ntBASIC17.12■□□□□ 0.33
CT55Q8WUE5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 AC113404.2-201ENST00000507884 177 ntBASIC17.12■□□□□ 0.33
CT55Q8WUE5 AC096582.2-201ENST00000510860 516 ntBASIC17.12■□□□□ 0.33
CT55Q8WUE5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
CT55Q8WUE5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CT55Q8WUE5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AC073130.3-201ENST00000624389 2278 ntBASIC17.11■□□□□ 0.33
CT55Q8WUE5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AF238378.1-201ENST00000526806 358 ntBASIC17.11■□□□□ 0.33
CT55Q8WUE5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.11■□□□□ 0.33
CT55Q8WUE5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 AC005332.7-201ENST00000614046 2005 ntBASIC17.11■□□□□ 0.33
CT55Q8WUE5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
CT55Q8WUE5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CT55Q8WUE5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 AL591684.3-201ENST00000605187 298 ntBASIC17.1■□□□□ 0.33
CT55Q8WUE5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 AC112777.1-201ENST00000540175 1423 ntBASIC17.1■□□□□ 0.33
CT55Q8WUE5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms