Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.35■■□□□ 1.17
SNED1Q8TER0 AP005117.1-201ENST00000584346 1413 ntBASIC22.34■■□□□ 1.17
SNED1Q8TER0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 GPX1P2-201ENST00000429271 606 ntBASIC22.34■■□□□ 1.17
SNED1Q8TER0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 AC098831.1-202ENST00000438821 336 ntBASIC22.34■■□□□ 1.17
SNED1Q8TER0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.34■■□□□ 1.17
SNED1Q8TER0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SNED1Q8TER0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNED1Q8TER0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNED1Q8TER0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNED1Q8TER0 RPSAP43-201ENST00000402237 625 ntBASIC22.33■■□□□ 1.17
SNED1Q8TER0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNED1Q8TER0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNED1Q8TER0 AL356488.2-201ENST00000602755 427 ntBASIC22.33■■□□□ 1.17
SNED1Q8TER0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SNED1Q8TER0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.33■■□□□ 1.17
SNED1Q8TER0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.16
SNED1Q8TER0 AC125634.1-201ENST00000438758 1403 ntBASIC22.33■■□□□ 1.16
SNED1Q8TER0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.33■■□□□ 1.16
SNED1Q8TER0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SNED1Q8TER0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SNED1Q8TER0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 MIR940-201ENST00000401276 94 ntBASIC22.32■■□□□ 1.16
SNED1Q8TER0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 RPS2P1-201ENST00000434010 821 ntBASIC22.32■■□□□ 1.16
SNED1Q8TER0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.32■■□□□ 1.16
SNED1Q8TER0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SNED1Q8TER0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 UPF3AP3-201ENST00000420996 769 ntBASIC22.31■■□□□ 1.16
SNED1Q8TER0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 AC027601.4-201ENST00000611259 610 ntBASIC22.31■■□□□ 1.16
SNED1Q8TER0 AL691403.2-201ENST00000618460 490 ntBASIC22.31■■□□□ 1.16
SNED1Q8TER0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 MED15P5-201ENST00000423150 992 ntBASIC22.31■■□□□ 1.16
SNED1Q8TER0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 AC009533.2-201ENST00000543664 586 ntBASIC22.31■■□□□ 1.16
SNED1Q8TER0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.31■■□□□ 1.16
SNED1Q8TER0 AC010327.4-202ENST00000591484 748 ntBASIC22.31■■□□□ 1.16
SNED1Q8TER0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SNED1Q8TER0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms